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"Enrichment of longevity phenotype in mtDNA haplogroups D4b2b, D4a, and D5 in the Japanese population.” Human Genetics 121:347-356 (2007)

Andrec, M., D. A. Snyder, Z. Zhou, J. Young, G. T. Montelione, R. M. Levy.

"A large data set comparison of protein structures determined by crystallography and NMR: statistical test for structural differences and the effect of crystal packing." Proteins 69:449-465 (2007)

Berman, H., K. Henrick, H. Nakamura, J.L. Markley.

“The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data.” Nucleic Acids Res 35 (Database issue):D301-303 (2007)

Boczko, E., T. Gedeon, K. Mischaikow.

“Dynamics of a simple regulatory switch.” J Math Biol.55:679-719 (2007)

Dalgin, G.S., G. Alexe, D. Scanfeld, P. Tamayo, J.P. Mesirov, S. Ganesan, C. Delisi, G. Bhanot.

“Portraits of breast cancer progression.” BMC Bioinformatics.8:291 (2007)

Li, Y., B. Brodsky, J. Baum.

“NMR shows hydrophobic interactions replace glycine packing in the triple-helix at a natural break in the (GLY-X-Y)N repeat." J Biol Chem. 282:22699-22706 (2007)

Maass, W., P. Joshi, E.D. Sontag.

“Computational aspects of feedback in neural circuits.” PLoS Comput Biol. 3:e165 (2007)

Sedighi, M., A. M. Sengupta.

"Epigenetic chromatin silencing: bistability and front propagation." Phys Biol. 4:246-255 (2007)

Tolstorukov, M.Y., A.V. Colasanti, D.M. McCandlish, W.K. Olson, V.B. Zhurkin.

“A novel roll-and-slide mechanism of DNA folding in chromatin: Implications for nucleosome positioning.” J Mol Biol.371:725-738 (2007)

Weinstock, D.S., C. Narayanan, A.K. Felts, M. Andrec, R.M. Levy, K.P. Wu, J. Baum.

“Distinguishing among structural ensembles of the GB1 peptide: REMD simulations and NMR experiments.”   J Am Chem Soc. 129:4858-9 (2007)

Zheng, W., M. Andrec, E. Gallicchio, R.M. Levy.

"Simulating replica exchange simulations of protein folding with a kinetic network model."   Proc Natl Acad Sci U S A. 104:15340-5 (2007)